BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G03SP1|AL426575
(851 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1687 1612 0.0
>3x_Contig1687
Length = 12800
Score = 1612 bits (803), Expect = 0.0
Identities = 833/851 (97%), Gaps = 1/851 (0%)
Strand = Plus / Plus
Query: 1 atttacggtggagaagaactatttaaggacgaagaaaaaagatctaaacagatggctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9069 atttacggtggagaagaactatttaaggacgaagaaaaaagatctaaacagatggctaac 9128
Query: 61 aggaaagtggtcgtcgaaggttatatctggggtaacgattacgaacctattctaaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9129 aggaaagtggtcgtcgaaggttatatctggggtaacgattacgaacctattctaaagcat 9188
Query: 121 ctacctcaagatcagcaaaaatttgatttgattattctctcagatttagtgttcaatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9189 ctacctcaagatcagcaaaaatttgatttgattattctctcagatttagtgttcaatcat 9248
Query: 181 accgaacatgcaaaattgttcaagacgacaaaagacctgttgagagaaaakgggaaggcg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9249 accgaacatgcaaaattgttcaagacgacaaaagacctgttgagagaaaatgggaaggcg 9308
Query: 241 ttggtagtcttttctccacacagaccatggttgctagamaatgatttggcgttcttcaaa 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9309 ttggtagtcttttctccacacagaccatggttgctagaaaatgatttggcgttcttcaaa 9368
Query: 301 gattgtgaggaatttggtttgaaatcagatctcatcgagttgacccattggaagccaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9369 gattgtgaggaatttggtttgaaatcagatctcatcgagttgacccattggaagccaatg 9428
Query: 361 tttgatgaagatgaagaaaccgttgaaattagatccagcatttacgcttattacttatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9429 tttgatgaagatgaagaaaccgttgaaattagatccagcatttacgcttattacttatct 9488
Query: 421 catatatmavmcgtacactaagtagtcacatcattatgatcagatgagcaagattttttt 480
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9489 catatataaaacgtacactaagtagtcacatcattatgatcagatgagcaagattttttt 9548
Query: 481 tgccttgtaataatatmmgtygagaattatgattagtttttmatttaagttaatattagt 540
|||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 9549 tgccttgtaataatataagttgagaattatgattagtttttaatttaagttaatattagt 9608
Query: 541 tatgatattacactgaaaatagacaaataaaaatatgataaggctacacgagtactacgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9609 tatgatattacactgaaaatagacaaataaaaatatgataaggctacacgagtactacgg 9668
Query: 601 tctaggtcatagacgatgtatacagtcatgcagaammmtgttgtgtgaagataacatttt 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9669 tctaggtcatagacgatgtatacagtcatgcagaaaaatgttgtgtgaagataacatttt 9728
Query: 661 cgatataagtsaaccattttgttcgatcactggttattaatgcgcagasatggagtttcg 720
|||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 9729 cgatataagtaaaccattttgttcgatcactggttattaatg-gaagaaatggagtttcg 9787
Query: 721 ttaacagatgtaacaggctgtatcaaaatgaaggaaatatatgtvataataattcctaat 780
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 9788 ttaacagatgtaacaggctgtatcaaaatgaaggaaatatatgtaataataattcctaat 9847
Query: 781 gcaaacatgcttgggtatgaggttgatggamattctgtaaccactgattagaaaaccacg 840
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9848 gcaaacatgcttgggtatgaggttgatggacattctgtaaccactgattagaaaaccacg 9907
Query: 841 tctggtttcaa 851
|||||||||||
Sbjct: 9908 tctggtttcaa 9918
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6466
Number of Sequences: 1807
Number of extensions: 6466
Number of successful extensions: 189
Number of sequences better than 1.0e-20: 1
length of query: 851
length of database: 10,358,551
effective HSP length: 16
effective length of query: 835
effective length of database: 10,329,639
effective search space: 8625248565
effective search space used: 8625248565
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)